Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.27■□□□□ 0.04
PCNAP12004 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.27■□□□□ 0.04
PCNAP12004 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 AC106881.1-201ENST00000605849 3329 ntBASIC15.27■□□□□ 0.04
PCNAP12004 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.27■□□□□ 0.04
PCNAP12004 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCNAP12004 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCNAP12004 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCNAP12004 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.27■□□□□ 0.04
PCNAP12004 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 EEF1DP4-201ENST00000446006 880 ntBASIC15.27■□□□□ 0.04
PCNAP12004 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCNAP12004 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.27■□□□□ 0.04
PCNAP12004 AC109322.1-201ENST00000524499 1264 ntBASIC15.27■□□□□ 0.04
PCNAP12004 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PCNAP12004 AC004449.1-201ENST00000564240 433 ntBASIC15.27■□□□□ 0.04
PCNAP12004 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.27■□□□□ 0.04
PCNAP12004 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.27■□□□□ 0.04
PCNAP12004 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCNAP12004 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.27■□□□□ 0.03
PCNAP12004 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PCNAP12004 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCNAP12004 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.27■□□□□ 0.03
PCNAP12004 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.27■□□□□ 0.03
PCNAP12004 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCNAP12004 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCNAP12004 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 OR2I1P-209ENST00000641730 5365 ntBASIC15.26■□□□□ 0.03
PCNAP12004 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.26■□□□□ 0.03
PCNAP12004 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PCNAP12004 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.26■□□□□ 0.03
PCNAP12004 AL589739.1-201ENST00000607720 493 ntBASIC15.26■□□□□ 0.03
PCNAP12004 AL133215.2-201ENST00000609242 977 ntBASIC15.26■□□□□ 0.03
PCNAP12004 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.26■□□□□ 0.03
PCNAP12004 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.26■□□□□ 0.03
PCNAP12004 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCNAP12004 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.26■□□□□ 0.03
PCNAP12004 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.26■□□□□ 0.03
PCNAP12004 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCNAP12004 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
PCNAP12004 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.25■□□□□ 0.03
PCNAP12004 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PCNAP12004 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PCNAP12004 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCNAP12004 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.25■□□□□ 0.03
PCNAP12004 AC105250.1-201ENST00000509378 2057 ntBASIC15.25■□□□□ 0.03
PCNAP12004 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.25■□□□□ 0.03
PCNAP12004 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCNAP12004 AC069262.1-201ENST00000539058 672 ntBASIC15.25■□□□□ 0.03
PCNAP12004 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms