Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.31■□□□□ 0.52
TOP1P11387 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TOP1P11387 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.31■□□□□ 0.52
TOP1P11387 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.31■□□□□ 0.52
TOP1P11387 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.31■□□□□ 0.52
TOP1P11387 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP1P11387 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP1P11387 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP1P11387 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 AC023824.1-201ENST00000562945 2975 ntBASIC18.3■□□□□ 0.52
TOP1P11387 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TOP1P11387 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 AP003680.1-201ENST00000598970 3660 ntBASIC18.3■□□□□ 0.52
TOP1P11387 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 AP005117.1-202ENST00000581724 1908 ntBASIC18.3■□□□□ 0.52
TOP1P11387 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.3■□□□□ 0.52
TOP1P11387 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TOP1P11387 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.3■□□□□ 0.52
TOP1P11387 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TOP1P11387 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TOP1P11387 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
TOP1P11387 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP1P11387 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 MST1L-201ENST00000442552 2185 ntBASIC18.3■□□□□ 0.52
TOP1P11387 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.3■□□□□ 0.52
TOP1P11387 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
TOP1P11387 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP1P11387 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 KRT17P7-201ENST00000451704 1104 ntBASIC18.29■□□□□ 0.52
TOP1P11387 RPL13AP25-201ENST00000484130 612 ntBASIC18.29■□□□□ 0.52
TOP1P11387 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP1P11387 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP1P11387 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP1P11387 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.29■□□□□ 0.52
TOP1P11387 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TOP1P11387 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TOP1P11387 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms