Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR3DP05423 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR3DP05423 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR3DP05423 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR3DP05423 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR3DP05423 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR3DP05423 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR3DP05423 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
POLR3DP05423 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
POLR3DP05423 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
POLR3DP05423 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
POLR3DP05423 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 AC112492.5-201ENST00000421897 457 ntBASIC18.62■□□□□ 0.57
POLR3DP05423 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.62■□□□□ 0.57
POLR3DP05423 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR3DP05423 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.62■□□□□ 0.57
POLR3DP05423 RAB43P1-201ENST00000561790 589 ntBASIC18.62■□□□□ 0.57
POLR3DP05423 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR3DP05423 AC000095.1-201ENST00000603208 874 ntBASIC18.62■□□□□ 0.57
POLR3DP05423 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR3DP05423 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR3DP05423 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR3DP05423 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR3DP05423 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
POLR3DP05423 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
POLR3DP05423 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR3DP05423 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR3DP05423 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 SOCS2P1-201ENST00000417727 557 ntBASIC18.61■□□□□ 0.57
POLR3DP05423 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR3DP05423 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR3DP05423 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR3DP05423 AC106886.1-201ENST00000568660 600 ntBASIC18.61■□□□□ 0.57
POLR3DP05423 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR3DP05423 AC008735.3-201ENST00000596646 500 ntBASIC18.61■□□□□ 0.57
POLR3DP05423 AL359881.2-201ENST00000602973 570 ntBASIC18.61■□□□□ 0.57
POLR3DP05423 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.61■□□□□ 0.57
POLR3DP05423 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR3DP05423 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLR3DP05423 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR3DP05423 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR3DP05423 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.6■□□□□ 0.57
POLR3DP05423 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 AL133267.1-201ENST00000398220 340 ntBASIC18.6■□□□□ 0.57
POLR3DP05423 C1QBPP1-201ENST00000400117 770 ntBASIC18.6■□□□□ 0.57
POLR3DP05423 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR3DP05423 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR3DP05423 AC120045.2-201ENST00000567334 178 ntBASIC18.6■□□□□ 0.57
POLR3DP05423 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 AC015936.2-201ENST00000593177 259 ntBASIC18.6■□□□□ 0.57
POLR3DP05423 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
POLR3DP05423 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms