Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC134698.3-201ENST00000523880 214 ntBASIC17.44■□□□□ 0.38
HMGCRP04035 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCRP04035 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 PPY2P-201ENST00000582808 702 ntBASIC17.44■□□□□ 0.38
HMGCRP04035 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.44■□□□□ 0.38
HMGCRP04035 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HMGCRP04035 AC091544.8-201ENST00000619490 361 ntBASIC17.44■□□□□ 0.38
HMGCRP04035 AL353726.2-201ENST00000623259 884 ntBASIC17.44■□□□□ 0.38
HMGCRP04035 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HMGCRP04035 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCRP04035 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGCRP04035 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCRP04035 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCRP04035 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGCRP04035 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCRP04035 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 MIR3907-201ENST00000579424 151 ntBASIC17.43■□□□□ 0.38
HMGCRP04035 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCRP04035 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCRP04035 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HMGCRP04035 TUBBP5-203ENST00000508529 1334 ntBASIC17.43■□□□□ 0.38
HMGCRP04035 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGCRP04035 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 MTHFR-217ENST00000641820 1569 ntBASIC17.42■□□□□ 0.38
HMGCRP04035 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
HMGCRP04035 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HMGCRP04035 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCRP04035 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCRP04035 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.42■□□□□ 0.38
HMGCRP04035 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCRP04035 AC079336.7-201ENST00000623428 1078 ntBASIC17.42■□□□□ 0.38
HMGCRP04035 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCRP04035 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HMGCRP04035 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGCRP04035 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.42■□□□□ 0.38
HMGCRP04035 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGCRP04035 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGCRP04035 AC092978.1-202ENST00000637590 1327 ntBASIC17.42■□□□□ 0.38
HMGCRP04035 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGCRP04035 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGCRP04035 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCRP04035 AL662844.4-201ENST00000606367 2838 ntBASIC17.41■□□□□ 0.38
HMGCRP04035 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCRP04035 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCRP04035 CYP2T1P-202ENST00000641596 2535 ntBASIC17.41■□□□□ 0.38
HMGCRP04035 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.41■□□□□ 0.38
HMGCRP04035 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCRP04035 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCRP04035 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGCRP04035 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCRP04035 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGCRP04035 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms