Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP000356.3-201ENST00000382243 753 ntBASIC15.45■□□□□ 0.06
PDGFBP01127 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 AP002803.1-201ENST00000528836 498 ntBASIC15.45■□□□□ 0.06
PDGFBP01127 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.45■□□□□ 0.06
PDGFBP01127 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.45■□□□□ 0.06
PDGFBP01127 AC004466.1-201ENST00000599515 1080 ntBASIC15.45■□□□□ 0.06
PDGFBP01127 AC138894.2-201ENST00000602838 371 ntBASIC15.45■□□□□ 0.06
PDGFBP01127 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PDGFBP01127 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFBP01127 AC012362.1-201ENST00000434906 739 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 RPL7P35-201ENST00000446943 740 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 RCC2P8-201ENST00000502779 1035 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 IGHV3-37-201ENST00000518544 340 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.44■□□□□ 0.06
PDGFBP01127 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 SNORD3B-2-202ENST00000571722 791 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFBP01127 MIR4649-201ENST00000582839 64 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.44■□□□□ 0.06
PDGFBP01127 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.44■□□□□ 0.06
PDGFBP01127 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PDGFBP01127 AL136295.7-201ENST00000619226 1200 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.44■□□□□ 0.06
PDGFBP01127 NAP1L6-202ENST00000641404 1222 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PDGFBP01127 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFBP01127 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFBP01127 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFBP01127 AC022188.1-201ENST00000620960 1664 ntBASIC15.44■□□□□ 0.06
PDGFBP01127 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.43■□□□□ 0.06
PDGFBP01127 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 AL157792.1-201ENST00000488281 530 ntBASIC15.43■□□□□ 0.06
PDGFBP01127 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PDGFBP01127 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.43■□□□□ 0.06
PDGFBP01127 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 AC100827.2-201ENST00000563214 1194 ntBASIC15.43■□□□□ 0.06
PDGFBP01127 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.43■□□□□ 0.06
PDGFBP01127 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 AC068880.1-201ENST00000507289 2297 ntBASIC15.43■□□□□ 0.06
PDGFBP01127 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms