Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.67□□□□□ -0.06
LDB3O75112 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LDB3O75112 AC093004.1-201ENST00000508850 424 ntBASIC14.67□□□□□ -0.06
LDB3O75112 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.67□□□□□ -0.06
LDB3O75112 RARRES2P5-201ENST00000564013 466 ntBASIC14.67□□□□□ -0.06
LDB3O75112 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.67□□□□□ -0.06
LDB3O75112 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.67□□□□□ -0.06
LDB3O75112 AL391069.4-201ENST00000609583 481 ntBASIC14.67□□□□□ -0.06
LDB3O75112 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LDB3O75112 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LDB3O75112 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.67□□□□□ -0.06
LDB3O75112 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LDB3O75112 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LDB3O75112 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LDB3O75112 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 C18orf15-201ENST00000623680 2534 ntBASIC14.66□□□□□ -0.06
LDB3O75112 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 AC092384.3-202ENST00000564646 2873 ntBASIC14.66□□□□□ -0.06
LDB3O75112 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
LDB3O75112 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 SLC7A15P-201ENST00000424028 1363 ntBASIC14.66□□□□□ -0.06
LDB3O75112 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.66□□□□□ -0.06
LDB3O75112 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
LDB3O75112 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LDB3O75112 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LDB3O75112 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms