Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HOXA2O43364 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HOXA2O43364 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.55■□□□□ 0.24
HOXA2O43364 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 AC079178.1-201ENST00000420915 656 ntBASIC16.55■□□□□ 0.24
HOXA2O43364 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 CALR4P-201ENST00000431943 946 ntBASIC16.55■□□□□ 0.24
HOXA2O43364 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 AC091804.1-201ENST00000486888 567 ntBASIC16.55■□□□□ 0.24
HOXA2O43364 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA2O43364 SAMD11P1-201ENST00000571429 661 ntBASIC16.55■□□□□ 0.24
HOXA2O43364 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HOXA2O43364 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA2O43364 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA2O43364 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HOXA2O43364 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXA2O43364 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXA2O43364 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXA2O43364 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXA2O43364 AC022188.1-201ENST00000620960 1664 ntBASIC16.54■□□□□ 0.24
HOXA2O43364 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.54■□□□□ 0.24
HOXA2O43364 FAM8A4P-201ENST00000435433 1213 ntBASIC16.54■□□□□ 0.24
HOXA2O43364 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.54■□□□□ 0.24
HOXA2O43364 AC022616.1-201ENST00000518688 554 ntBASIC16.54■□□□□ 0.24
HOXA2O43364 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HOXA2O43364 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.54■□□□□ 0.24
HOXA2O43364 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXA2O43364 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.54■□□□□ 0.24
HOXA2O43364 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.54■□□□□ 0.24
HOXA2O43364 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXA2O43364 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
HOXA2O43364 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXA2O43364 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXA2O43364 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXA2O43364 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.53■□□□□ 0.24
HOXA2O43364 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.53■□□□□ 0.24
HOXA2O43364 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 POM121L10P-201ENST00000436994 1285 ntBASIC16.53■□□□□ 0.24
HOXA2O43364 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXA2O43364 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HOXA2O43364 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXA2O43364 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HOXA2O43364 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms