Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 AC097376.2-205ENST00000610159 5334 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 MIR1233-2-201ENST00000408138 82 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 MIR1233-1-201ENST00000408722 82 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 AL512361.1-201ENST00000554200 418 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.78□□□□□ -0.52
SOCS3O14543 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 Z92544.3-201ENST00000624747 417 ntBASIC11.78□□□□□ -0.52
SOCS3O14543 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SOCS3O14543 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.78□□□□□ -0.52
SOCS3O14543 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.78□□□□□ -0.52
SOCS3O14543 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SOCS3O14543 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.77□□□□□ -0.52
SOCS3O14543 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SOCS3O14543 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SOCS3O14543 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SOCS3O14543 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
SOCS3O14543 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SOCS3O14543 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.77□□□□□ -0.52
SOCS3O14543 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SOCS3O14543 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.77□□□□□ -0.52
SOCS3O14543 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.77□□□□□ -0.52
SOCS3O14543 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SOCS3O14543 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SOCS3O14543 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SOCS3O14543 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SOCS3O14543 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.77□□□□□ -0.53
SOCS3O14543 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SOCS3O14543 RPL13P2-201ENST00000440687 659 ntBASIC11.77□□□□□ -0.53
SOCS3O14543 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.77□□□□□ -0.53
SOCS3O14543 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.77□□□□□ -0.53
SOCS3O14543 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.77□□□□□ -0.53
SOCS3O14543 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SOCS3O14543 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SOCS3O14543 AC010336.2-201ENST00000564226 506 ntBASIC11.77□□□□□ -0.53
SOCS3O14543 AC015910.1-201ENST00000579400 975 ntBASIC11.77□□□□□ -0.53
SOCS3O14543 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.77□□□□□ -0.53
SOCS3O14543 AL138828.2-201ENST00000615812 383 ntBASIC11.77□□□□□ -0.53
SOCS3O14543 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.77□□□□□ -0.53
SOCS3O14543 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.77□□□□□ -0.53
SOCS3O14543 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SOCS3O14543 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms