Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 DBET-201ENST00000630918 3363 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP3B1O00203 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 RPL37AP1-201ENST00000412502 279 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 GHSR-202ENST00000427970 912 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 RN7SL618P-201ENST00000477850 296 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 SDHAP3-202ENST00000515467 728 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.78■□□□□ 0.12
AP3B1O00203 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.78■□□□□ 0.12
AP3B1O00203 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.78■□□□□ 0.12
AP3B1O00203 AC011467.4-201ENST00000594891 528 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 AC074044.1-201ENST00000609673 707 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.78■□□□□ 0.12
AP3B1O00203 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 AGAP7P-201ENST00000582299 2062 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 AGAP14-201ENST00000624701 2060 ntBASIC15.78■□□□□ 0.12
AP3B1O00203 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.78■□□□□ 0.12
AP3B1O00203 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP3B1O00203 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP3B1O00203 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3B1O00203 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP3B1O00203 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3B1O00203 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 ZBED1P1-201ENST00000502364 1930 ntBASIC15.77■□□□□ 0.12
AP3B1O00203 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3B1O00203 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP3B1O00203 KRT18P13-201ENST00000400056 1290 ntBASIC15.77■□□□□ 0.12
AP3B1O00203 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
AP3B1O00203 TOMM22P5-201ENST00000416399 439 ntBASIC15.77■□□□□ 0.12
AP3B1O00203 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.77■□□□□ 0.12
AP3B1O00203 AC067863.1-201ENST00000494933 530 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms