Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX39AO00148 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.51■□□□□ 0.39
DDX39AO00148 DRD5P1-201ENST00000456605 1438 ntBASIC17.51■□□□□ 0.39
DDX39AO00148 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.51■□□□□ 0.39
DDX39AO00148 TDH-203ENST00000531764 1110 ntBASIC17.51■□□□□ 0.39
DDX39AO00148 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.51■□□□□ 0.39
DDX39AO00148 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.51■□□□□ 0.39
DDX39AO00148 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.51■□□□□ 0.39
DDX39AO00148 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
DDX39AO00148 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX39AO00148 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 AC022188.1-201ENST00000620960 1664 ntBASIC17.51■□□□□ 0.39
DDX39AO00148 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
DDX39AO00148 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX39AO00148 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX39AO00148 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX39AO00148 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX39AO00148 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
DDX39AO00148 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
DDX39AO00148 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX39AO00148 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 OR8S1-201ENST00000310194 1080 ntBASIC17.5■□□□□ 0.39
DDX39AO00148 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.5■□□□□ 0.39
DDX39AO00148 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX39AO00148 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX39AO00148 AC025181.2-201ENST00000606994 802 ntBASIC17.5■□□□□ 0.39
DDX39AO00148 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX39AO00148 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
DDX39AO00148 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
DDX39AO00148 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX39AO00148 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX39AO00148 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX39AO00148 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 AC112492.5-201ENST00000421897 457 ntBASIC17.49■□□□□ 0.39
DDX39AO00148 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX39AO00148 AP001582.1-201ENST00000525856 295 ntBASIC17.49■□□□□ 0.39
DDX39AO00148 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX39AO00148 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX39AO00148 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX39AO00148 AC007950.2-201ENST00000615045 2347 ntBASIC17.49■□□□□ 0.39
DDX39AO00148 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX39AO00148 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX39AO00148 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms