Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 SRD5A3P1-201ENST00000603021 949 ntBASIC13.77□□□□□ -0.21
NPIPB4C9JG80 REXO1L4P-201ENST00000605109 1937 ntBASIC13.77□□□□□ -0.21
NPIPB4C9JG80 AL390754.1-201ENST00000619088 582 ntBASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.77□□□□□ -0.21
NPIPB4C9JG80 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NPIPB4C9JG80 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 FAM45BP-202ENST00000592932 1624 ntBASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MEP1AP4-201ENST00000423244 1087 ntBASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RRP7BP-205ENST00000566851 833 ntBASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SAMD11P1-201ENST00000571429 661 ntBASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 PKD1P5-201ENST00000532415 10291 ntBASIC13.76□□□□□ -0.21
NPIPB4C9JG80 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPB4C9JG80 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NPIPB4C9JG80 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
NPIPB4C9JG80 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPB4C9JG80 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms