Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 CYP4F24P-201ENST00000586049 1580 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AL354702.1-201ENST00000442006 1960 ntBASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.98□□□□□ -0.65
LINC01546A6NGU7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01546A6NGU7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AL031133.1-201ENST00000406807 723 ntBASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms