Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
MBD3L3A6NE82 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 TPM3P8-201ENST00000330554 643 ntBASIC13.58□□□□□ -0.24
MBD3L3A6NE82 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 RPL13AP20-201ENST00000459725 609 ntBASIC13.58□□□□□ -0.24
MBD3L3A6NE82 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L3A6NE82 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 CICP13-201ENST00000422015 2789 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 MIR1202-201ENST00000408529 83 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 FAM8A2P-201ENST00000528813 1142 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 ECM1P1-201ENST00000604092 1279 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 ENPP7P14-201ENST00000621765 1040 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC026691.1-201ENST00000602502 2017 ntBASIC13.57□□□□□ -0.24
MBD3L3A6NE82 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L3A6NE82 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC105250.1-201ENST00000509378 2057 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms