Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 DGCR5-201ENST00000399539 862 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC074338.1-201ENST00000416825 156 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 KRT17P7-201ENST00000451704 1104 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC025048.3-201ENST00000590609 569 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC008494.3-201ENST00000606615 944 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC005702.4-201ENST00000618393 416 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 AC007431.3-201ENST00000623221 587 ntBASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPDC1A2A3K4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC138969.3-201ENST00000546612 1459 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC138932.2-201ENST00000548268 1459 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC126755.4-201ENST00000549796 1459 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 CU639417.3-201ENST00000624240 1404 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC011270.2-201ENST00000624293 2550 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC023310.3-201ENST00000557027 670 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC100756.1-201ENST00000562736 682 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC138749.3-201ENST00000567691 622 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC074044.1-201ENST00000609673 707 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC116165.1-201ENST00000611806 668 ntBASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPDC1A2A3K4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPDC1A2A3K4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 GK-202ENST00000378941 458 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AC055876.2-201ENST00000531834 546 ntBASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms