Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 FAM86HP-204ENST00000513466 959 ntBASIC16.17■□□□□ 0.18
YIPF1Q9Y548 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 GPR182-203ENST00000622922 591 ntBASIC16.17■□□□□ 0.18
YIPF1Q9Y548 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 AHCYP2-201ENST00000430630 1300 ntBASIC16.17■□□□□ 0.18
YIPF1Q9Y548 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF1Q9Y548 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 LRRC59-203ENST00000576448 1531 ntBASIC16.16■□□□□ 0.18
YIPF1Q9Y548 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AL139094.1-201ENST00000405549 1188 ntBASIC16.16■□□□□ 0.18
YIPF1Q9Y548 MIR1202-201ENST00000408529 83 ntBASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.16■□□□□ 0.18
YIPF1Q9Y548 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF1Q9Y548 AL158070.2-201ENST00000623713 1621 ntBASIC16.16■□□□□ 0.18
YIPF1Q9Y548 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 PFN1P12-201ENST00000455938 534 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms