Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 UPF3AP3-201ENST00000420996 769 ntBASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 MTND6P24-201ENST00000440466 518 ntBASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 AC023141.5-201ENST00000458585 616 ntBASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
POLR1DQ9Y2S0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AL596257.1-201ENST00000641463 2694 ntBASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC068418.2-201ENST00000577309 3703 ntBASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 PHKG1P2-201ENST00000457537 863 ntBASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC105021.1-202ENST00000570572 669 ntBASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR1DQ9Y2S0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR1DQ9Y2S0 AL031595.1-201ENST00000623969 4709 ntBASIC14□□□□□ -0.17
POLR1DQ9Y2S0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms