Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AL157791.1-201ENST00000553667 1699 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 DOC2GP-204ENST00000639052 2548 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 LRRC59-203ENST00000576448 1531 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 FLJ38576-201ENST00000623820 2459 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 MIR1227-201ENST00000408484 88 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 AC100850.1-201ENST00000506768 649 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 AC012044.1-201ENST00000603431 297 ntBASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ZC3H4Q9UPT8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 DNM1P30-201ENST00000563586 452 ntBASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 AL136295.7-201ENST00000619226 1200 ntBASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.67■□□□□ 0.58
ZC3H4Q9UPT8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AL645937.2-201ENST00000396808 931 ntBASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms