Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DKK4Q9UBT3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DKK4Q9UBT3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DKK4Q9UBT3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
DKK4Q9UBT3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DKK4Q9UBT3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC073150.1-201ENST00000450406 1084 ntBASIC14.29□□□□□ -0.12
DKK4Q9UBT3 MESTP3-201ENST00000503460 968 ntBASIC14.29□□□□□ -0.12
DKK4Q9UBT3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC009955.4-201ENST00000597192 544 ntBASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC242376.2-201ENST00000619355 883 ntBASIC14.29□□□□□ -0.12
DKK4Q9UBT3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AC007787.1-201ENST00000588095 1583 ntBASIC14.29□□□□□ -0.12
DKK4Q9UBT3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DKK4Q9UBT3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ME2P1-201ENST00000426028 1970 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 GHSR-202ENST00000427970 912 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AL139008.1-201ENST00000437894 228 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 RCC2P8-201ENST00000502779 1035 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC009779.1-201ENST00000551138 283 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC100827.2-201ENST00000563214 1194 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 AC138894.2-201ENST00000602838 371 ntBASIC14.28□□□□□ -0.12
DKK4Q9UBT3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DKK4Q9UBT3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms