Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC133539.2-201ENST00000604757 467 ntBASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.64■□□□□ 0.42
HDAC6Q9UBN7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HDAC6Q9UBN7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HDAC6Q9UBN7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 KRT18P64-201ENST00000434946 1219 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 FAM86LP-201ENST00000478302 853 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 SLC25A47P1-201ENST00000531577 414 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AL359711.2-201ENST00000563105 872 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 CU634019.7-201ENST00000624153 1185 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 FP236241.2-201ENST00000624906 1185 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AL033527.4-201ENST00000641026 673 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 AC018665.1-201ENST00000622927 1362 ntBASIC17.64■□□□□ 0.41
HDAC6Q9UBN7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 AC104989.1-201ENST00000519711 778 ntBASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms