Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 MIR1202-201ENST00000408529 83 ntBASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 AL138709.1-201ENST00000614840 1693 ntBASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM7Q9NR12 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 AL590640.2-201ENST00000457038 527 ntBASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 RN7SL769P-201ENST00000469386 295 ntBASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 AC145423.3-201ENST00000615987 467 ntBASIC17.27■□□□□ 0.36
PDLIM7Q9NR12 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM7Q9NR12 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 AC007950.2-201ENST00000615045 2347 ntBASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 AP003680.1-201ENST00000598970 3660 ntBASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM7Q9NR12 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM7Q9NR12 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms