Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AC148477.8-201ENST00000624298 468 ntBASIC19.24■□□□□ 0.67
UPF2Q9HAU5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
UPF2Q9HAU5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AC005912.2-201ENST00000619492 2400 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 RPS8P6-201ENST00000426177 609 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AC105233.2-201ENST00000523697 349 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AF228730.5-201ENST00000530288 346 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 AC073389.1-201ENST00000595595 795 ntBASIC19.23■□□□□ 0.67
UPF2Q9HAU5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF2Q9HAU5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 AC012313.10-201ENST00000623509 926 ntBASIC19.22■□□□□ 0.67
UPF2Q9HAU5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 AC025580.3-201ENST00000617932 1424 ntBASIC19.22■□□□□ 0.67
UPF2Q9HAU5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 BCAR1-209ENST00000546196 1340 ntBASIC19.22■□□□□ 0.67
UPF2Q9HAU5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF2Q9HAU5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms