Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 CLK3P2-201ENST00000427566 1453 ntBASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.42■□□□□ 0.38
CCSER1Q9C0I3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 BCRP1-201ENST00000444246 691 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 GAPDHP40-201ENST00000505218 1006 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 RNA5SP421-201ENST00000516864 134 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 RARRES2P5-201ENST00000564013 466 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 AC104794.3-201ENST00000566840 1248 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 AC011467.4-201ENST00000594891 528 ntBASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.41■□□□□ 0.38
CCSER1Q9C0I3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCSER1Q9C0I3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCSER1Q9C0I3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCSER1Q9C0I3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CCSER1Q9C0I3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CCSER1Q9C0I3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.39■□□□□ 0.37
CCSER1Q9C0I3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms