Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AC022616.1-201ENST00000518688 554 ntBASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AC138701.2-201ENST00000553634 226 ntBASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL25A1Q9BXS0 LINC02012-201ENST00000608206 1725 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 LINC01144-201ENST00000626198 1710 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 SNORA57-201ENST00000383870 149 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AL645937.2-201ENST00000396808 931 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC068867.1-201ENST00000559855 150 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC004466.1-201ENST00000599515 1080 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AL589935.2-201ENST00000616471 1231 ntBASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.34■□□□□ 0.05
COL25A1Q9BXS0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.33■□□□□ 0.05
COL25A1Q9BXS0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 HMGA1P2-201ENST00000430198 324 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 RN7SL23P-201ENST00000484055 275 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 RN7SL288P-201ENST00000490496 291 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 KNOP1P1-201ENST00000542108 989 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC009884.2-201ENST00000603110 324 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AL118522.1-201ENST00000611368 560 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 Z98259.2-201ENST00000641583 609 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC025183.3-201ENST00000623526 1482 ntBASIC15.33■□□□□ 0.04
COL25A1Q9BXS0 AC008536.3-201ENST00000623282 1599 ntBASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms