Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 TFAMP1-201ENST00000412727 736 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 RN7SL589P-201ENST00000481268 310 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.26■□□□□ 0.03
PRPF18Q99633 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.26■□□□□ 0.03
PRPF18Q99633 AC106730.1-201ENST00000566722 1090 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.26■□□□□ 0.03
PRPF18Q99633 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
PRPF18Q99633 AC099522.2-201ENST00000607001 744 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRPF18Q99633 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRPF18Q99633 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 AL390755.1-201ENST00000623716 2027 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 AC041040.2-201ENST00000622926 2899 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPF18Q99633 AL691432.1-201ENST00000596308 1422 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPF18Q99633 PTENP1-202ENST00000532280 3996 ntBASIC15.26■□□□□ 0.03
PRPF18Q99633 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPF18Q99633 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AL135744.1-201ENST00000565098 629 ntBASIC15.25■□□□□ 0.03
PRPF18Q99633 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AL138918.1-201ENST00000568306 659 ntBASIC15.25■□□□□ 0.03
PRPF18Q99633 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AC027307.2-201ENST00000591252 911 ntBASIC15.25■□□□□ 0.03
PRPF18Q99633 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPF18Q99633 AC092865.6-201ENST00000642101 219 ntBASIC15.25■□□□□ 0.03
PRPF18Q99633 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRPF18Q99633 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPF18Q99633 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
PRPF18Q99633 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPF18Q99633 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPF18Q99633 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRPF18Q99633 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPF18Q99633 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRPF18Q99633 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRPF18Q99633 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRPF18Q99633 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPF18Q99633 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.24■□□□□ 0.03
PRPF18Q99633 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPF18Q99633 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.24■□□□□ 0.03
PRPF18Q99633 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PRPF18Q99633 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPF18Q99633 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPF18Q99633 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRPF18Q99633 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms