Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AL133267.1-201ENST00000398220 340 ntBASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 KRT18P64-201ENST00000434946 1219 ntBASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AC097493.3-201ENST00000509725 367 ntBASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MS4A4EQ96PG1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
MS4A4EQ96PG1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AC241585.1-201ENST00000433527 519 ntBASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 AC006538.3-201ENST00000612495 578 ntBASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MS4A4EQ96PG1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 LINC02228-204ENST00000642115 2962 ntBASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 AC023024.2-201ENST00000623561 1993 ntBASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MS4A4EQ96PG1 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms