Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 KRT8P23-201ENST00000560090 1207 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 FAM197Y3-203ENST00000618346 717 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 AC015656.1-201ENST00000624209 3578 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 AC087386.2-201ENST00000623212 4637 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 BNIP3P1-202ENST00000550043 1585 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.66□□□□□ -0.22
CPNE2Q96FN4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.66□□□□□ -0.22
CPNE2Q96FN4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPNE2Q96FN4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.23
CPNE2Q96FN4 KRT8P37-201ENST00000451609 1420 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC106881.1-201ENST00000605849 3329 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms