Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHC3Q92529 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.61■□□□□ 0.25
SHC3Q92529 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.61■□□□□ 0.25
SHC3Q92529 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.61■□□□□ 0.25
SHC3Q92529 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.61■□□□□ 0.25
SHC3Q92529 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.61■□□□□ 0.25
SHC3Q92529 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 WASH3P-207ENST00000560956 1394 ntBASIC16.61■□□□□ 0.25
SHC3Q92529 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC3Q92529 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.61■□□□□ 0.25
SHC3Q92529 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHC3Q92529 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.6■□□□□ 0.25
SHC3Q92529 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC3Q92529 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC3Q92529 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHC3Q92529 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC3Q92529 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC3Q92529 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 BASP1P1-201ENST00000430708 665 ntBASIC16.59■□□□□ 0.25
SHC3Q92529 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 CYMP-203ENST00000474680 1263 ntBASIC16.59■□□□□ 0.25
SHC3Q92529 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms