Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC005521.1-201ENST00000393351 872 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AP002383.4-201ENST00000442518 975 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 LINC00265-3P-201ENST00000447588 903 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 RPS15P9-201ENST00000494093 319 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC104819.1-201ENST00000504587 486 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC018529.2-202ENST00000611482 3087 ntBASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 CICP8-201ENST00000455800 2813 ntBASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MBD3L1Q8WWY6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC018442.1-201ENST00000421439 2061 ntBASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 MTDHP4-201ENST00000600287 670 ntBASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC073439.1-201ENST00000624121 1774 ntBASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 AC087386.2-201ENST00000623212 4637 ntBASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 DGCR9-201ENST00000609630 2415 ntBASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MBD3L1Q8WWY6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
MBD3L1Q8WWY6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms