Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FZD10-202ENST00000539839 3282 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 NUDT4P2-201ENST00000578341 546 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC133540.1-201ENST00000620845 1019 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC018629.1-201ENST00000623381 1736 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC006449.6-201ENST00000612330 2296 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 UROS-201ENST00000368774 744 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CR383656.3-201ENST00000551315 183 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC026320.2-201ENST00000434379 478 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC093909.3-201ENST00000504783 336 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC008723.1-201ENST00000506922 207 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 MIR648-201ENST00000385046 94 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AL627422.1-201ENST00000434104 580 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC018695.7-201ENST00000624587 2492 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AP000358.1-201ENST00000456260 156 ntBASIC10.19□□□□□ -0.78
ALMS1Q8TCU4 AC012073.1-201ENST00000606114 1108 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms