Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 AL589702.1-201ENST00000641229 1509 ntBASIC11.72□□□□□ -0.53
NUP35Q8NFH5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.72□□□□□ -0.53
NUP35Q8NFH5 AC063952.2-201ENST00000498792 1227 ntBASIC11.72□□□□□ -0.53
NUP35Q8NFH5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 AC092329.2-201ENST00000598402 547 ntBASIC11.72□□□□□ -0.53
NUP35Q8NFH5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NUP35Q8NFH5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AC006504.4-201ENST00000592118 1568 ntBASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AC005521.1-201ENST00000393351 872 ntBASIC11.71□□□□□ -0.53
NUP35Q8NFH5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 LINC00265-3P-201ENST00000447588 903 ntBASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms