Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 AL049840.4-201ENST00000602422 811 ntBASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 TMEM261P1-201ENST00000604899 340 ntBASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZIC4Q8N9L1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 VDAC1P7-201ENST00000462417 847 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC104596.2-201ENST00000512793 793 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 CTBP2P3-201ENST00000585629 1255 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC008494.3-201ENST00000606615 944 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AC007431.3-201ENST00000623221 587 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 AL645728.2-202ENST00000641679 227 ntBASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.76□□□□□ -0.21
ZIC4Q8N9L1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 AC006486.2-201ENST00000624246 2199 ntBASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC4Q8N9L1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms