Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 ANKRD19P-201ENST00000338192 862 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AL162726.2-201ENST00000438986 1017 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 TARDBPP1-201ENST00000442013 1203 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 SLC25A47P1-201ENST00000531577 414 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AC233724.13-201ENST00000598383 410 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CU634019.7-201ENST00000624153 1185 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 FP236241.2-201ENST00000624906 1185 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AL596087.1-201ENST00000400979 1969 ntBASIC16.98■□□□□ 0.31
VPS52Q8N1B4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS52Q8N1B4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 REXO1L6P-201ENST00000603433 1515 ntBASIC16.97■□□□□ 0.31
VPS52Q8N1B4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 AC006449.6-201ENST00000612330 2296 ntBASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 AC074338.1-201ENST00000416825 156 ntBASIC16.97■□□□□ 0.31
VPS52Q8N1B4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 BNIP3P1-202ENST00000550043 1585 ntBASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS52Q8N1B4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms