Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MIR557-201ENST00000385239 98 ntBASIC21.52■■□□□ 1.04
UBR1Q8IWV7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 ALG3P1-201ENST00000508806 1114 ntBASIC21.52■■□□□ 1.04
UBR1Q8IWV7 POU5F1P2-201ENST00000521750 823 ntBASIC21.52■■□□□ 1.04
UBR1Q8IWV7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 LINC01165-201ENST00000445190 1623 ntBASIC21.52■■□□□ 1.04
UBR1Q8IWV7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBR1Q8IWV7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 AC130709.1-201ENST00000484779 1212 ntBASIC21.52■■□□□ 1.03
UBR1Q8IWV7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.52■■□□□ 1.03
UBR1Q8IWV7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 AC136759.1-202ENST00000530858 2194 ntBASIC21.51■■□□□ 1.03
UBR1Q8IWV7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 AC012362.1-201ENST00000434906 739 ntBASIC21.51■■□□□ 1.03
UBR1Q8IWV7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 MIR6720-201ENST00000611664 98 ntBASIC21.51■■□□□ 1.03
UBR1Q8IWV7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 KRT8P31-201ENST00000504812 1408 ntBASIC21.51■■□□□ 1.03
UBR1Q8IWV7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
UBR1Q8IWV7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 AL596087.1-201ENST00000400979 1969 ntBASIC21.5■■□□□ 1.03
UBR1Q8IWV7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 TNRC18P3-201ENST00000441896 2691 ntBASIC21.5■■□□□ 1.03
UBR1Q8IWV7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBR1Q8IWV7 SLC9A7P1-202ENST00000556476 2239 ntBASIC21.5■■□□□ 1.03
UBR1Q8IWV7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AC103810.10-201ENST00000606504 343 ntBASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AC084781.1-201ENST00000613737 656 ntBASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms