Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 AC018735.1-201ENST00000437208 1502 ntBASIC16.84■□□□□ 0.29
HERC6Q8IVU3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.84■□□□□ 0.29
HERC6Q8IVU3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HERC6Q8IVU3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 MPRIPP1-201ENST00000452433 1089 ntBASIC16.83■□□□□ 0.28
HERC6Q8IVU3 RN7SL769P-201ENST00000469386 295 ntBASIC16.83■□□□□ 0.28
HERC6Q8IVU3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 MIR3619-201ENST00000579667 83 ntBASIC16.83■□□□□ 0.28
HERC6Q8IVU3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 AC138627.1-207ENST00000641560 1006 ntBASIC16.83■□□□□ 0.28
HERC6Q8IVU3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HERC6Q8IVU3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 KRT8P19-201ENST00000551916 1455 ntBASIC16.82■□□□□ 0.28
HERC6Q8IVU3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.82■□□□□ 0.28
HERC6Q8IVU3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HERC6Q8IVU3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AL391005.1-201ENST00000623953 2435 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AL133267.1-201ENST00000398220 340 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 POM121L10P-201ENST00000436994 1285 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 CHMP4BP1-201ENST00000556017 588 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 MIR4722-201ENST00000578292 60 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms