Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 FAM220BP-201ENST00000377689 816 ntBASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 AL139010.1-201ENST00000454878 894 ntBASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 RARRES2P8-201ENST00000566335 367 ntBASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRTM1Q86UE6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SBF1P1-201ENST00000444527 5631 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 AC136604.1-201ENST00000418535 575 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 KRT18P2-201ENST00000447938 1258 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 AC074386.1-202ENST00000463561 864 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 AC027307.2-201ENST00000591252 911 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 Z83851.2-201ENST00000609564 659 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 CICP11-201ENST00000434745 2827 ntBASIC13.59□□□□□ -0.23
LRRTM1Q86UE6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 AC015656.1-201ENST00000624209 3578 ntBASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms