Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 FKBP4P6-201ENST00000457486 1332 ntBASIC20.75■□□□□ 0.91
KRT28Q7Z3Y7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT28Q7Z3Y7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT28Q7Z3Y7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 AC100827.2-201ENST00000563214 1194 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 DUX4L47-201ENST00000566374 394 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 SNORD3B-2-202ENST00000571722 791 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 AC009955.4-201ENST00000597192 544 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 AL136301.1-201ENST00000615830 422 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 HLA-C-210ENST00000640219 976 ntBASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KRT28Q7Z3Y7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 RN7SKP214-201ENST00000364208 315 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 RPL18P13-201ENST00000478088 569 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 NPM1P43-201ENST00000558669 786 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 AC242376.1-201ENST00000559033 726 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 AL136295.7-201ENST00000619226 1200 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 OR6D1P-202ENST00000641007 5290 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 AC069224.1-201ENST00000566372 1715 ntBASIC20.73■□□□□ 0.91
KRT28Q7Z3Y7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 AC022211.2-201ENST00000585075 2527 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 AP000593.2-201ENST00000542775 1433 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 HLA-K-203ENST00000430151 1046 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 NOC2LP1-201ENST00000450578 752 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 RN7SL181P-201ENST00000462921 277 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT28Q7Z3Y7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms