Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 AL591424.1-201ENST00000442569 1213 ntBASIC14.19□□□□□ -0.14
SHFQ7M4L6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHFQ7M4L6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHFQ7M4L6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 FAM86C2P-203ENST00000528684 1004 ntBASIC14.18□□□□□ -0.14
SHFQ7M4L6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 AL138918.1-201ENST00000568306 659 ntBASIC14.18□□□□□ -0.14
SHFQ7M4L6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 INTS4P1-203ENST00000641008 3683 ntBASIC14.18□□□□□ -0.14
SHFQ7M4L6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHFQ7M4L6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms