Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC107890.1-201ENST00000422478 521 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 TSSK5P-201ENST00000423978 907 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ZNF890P-202ENST00000530367 1156 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AL158211.3-201ENST00000607385 239 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AL844908.2-201ENST00000609461 460 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AL590560.3-201ENST00000623350 461 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC073592.8-201ENST00000624126 511 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CICP24-201ENST00000605464 2705 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC112693.3-201ENST00000624819 1983 ntBASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NHLRC1Q6VVB1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC139749.1-202ENST00000617529 3139 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AL359258.3-201ENST00000622910 2331 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 METTL21AP1-201ENST00000438852 635 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 RPL13P2-201ENST00000440687 659 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC067863.1-201ENST00000494933 530 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC069120.2-201ENST00000524091 540 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 DUX4L27-201ENST00000554796 1261 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms