Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST2H2BCQ6DN03 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 MIR3180-2-201ENST00000581748 88 ntBASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 MIR4522-201ENST00000584932 87 ntBASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST2H2BCQ6DN03 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.15□□□□□ -0.31
HIST2H2BCQ6DN03 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST2H2BCQ6DN03 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.15□□□□□ -0.31
HIST2H2BCQ6DN03 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HIST2H2BCQ6DN03 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 AL592424.1-201ENST00000563624 1536 ntBASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 AL136309.1-201ENST00000403917 691 ntBASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST2H2BCQ6DN03 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms