Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FAM90A16P-201ENST00000526662 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A9P-201ENST00000527940 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A5P-201ENST00000528738 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A14P-201ENST00000530386 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A13P-201ENST00000534703 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AC018470.1-201ENST00000624790 3129 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 RN7SL258P-201ENST00000478664 300 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 OR2K2-202ENST00000374428 1038 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 VDAC1P1-201ENST00000439229 848 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 PEBP1P2-201ENST00000603980 558 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AC138466.3-201ENST00000619983 221 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CR392039.1-201ENST00000623217 204 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AC078875.1-201ENST00000431907 724 ntBASIC14.88□□□□□ -0.03
RIF1Q5UIP0 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 RN7SL470P-201ENST00000583069 259 ntBASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AL592424.1-201ENST00000563624 1536 ntBASIC14.88□□□□□ -0.03
RIF1Q5UIP0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 MRPL22P1-201ENST00000505398 616 ntBASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AP002490.2-201ENST00000524791 560 ntBASIC14.88□□□□□ -0.03
RIF1Q5UIP0 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RIF1Q5UIP0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms