Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AL603832.2-201ENST00000566195 2125 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 REXO1L4P-201ENST00000605109 1937 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC011742.3-201ENST00000439053 820 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 IGHV3-37-201ENST00000518544 340 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AL161773.1-201ENST00000624845 863 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 AC002472.3-201ENST00000640124 621 ntBASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13DQ5THJ4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC021723.1-201ENST00000486306 515 ntBASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AP001065.2-201ENST00000617205 644 ntBASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC239868.1-201ENST00000369385 493 ntBASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AC006122.1-201ENST00000493323 440 ntBASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 AD000864.1-201ENST00000624076 2295 ntBASIC10.19□□□□□ -0.78
VPS13DQ5THJ4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 CICP11-201ENST00000434745 2827 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 MIR557-201ENST00000385239 98 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms