Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 FAM197Y7-201ENST00000432892 766 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 C2orf27AP3-201ENST00000434123 579 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 RN7SL718P-201ENST00000581254 303 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AL354718.3-201ENST00000616414 581 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 AC009542.2-202ENST00000619004 1067 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 MIR6869-201ENST00000619434 62 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 GPR182-203ENST00000622922 591 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 BX539320.1-201ENST00000623759 877 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 CR382287.1-201ENST00000623954 586 ntBASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 RNU1-114P-201ENST00000365297 166 ntBASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 KRT18P25-201ENST00000508931 1278 ntBASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AC008687.7-202ENST00000637404 953 ntBASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNFT1Q5M7Z0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNFT1Q5M7Z0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms