Protein–RNA interactions for Protein: Q5JUK3

KCNT1, Potassium channel subfamily T member 1, humanhuman

Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1Q5JUK3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 MST1L-201ENST00000442552 2185 ntBASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CRB3P1-201ENST00000449338 276 ntBASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 HLA-V-204ENST00000476601 1289 ntBASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNT1Q5JUK3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AL512361.1-201ENST00000554200 418 ntBASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 AL513477.1-201ENST00000602865 2407 ntBASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KCNT1Q5JUK3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms