Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC010327.5-201ENST00000586923 3061 ntBASIC13.04□□□□□ -0.32
ANKRD55Q3KP44 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ANKRD55Q3KP44 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.04□□□□□ -0.32
ANKRD55Q3KP44 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ANKRD55Q3KP44 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.04□□□□□ -0.32
ANKRD55Q3KP44 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AC018712.1-201ENST00000455767 687 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AC079776.4-201ENST00000511039 504 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 TP73-AS1-207ENST00000624167 988 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ACE3P-201ENST00000423435 1973 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AL691432.1-201ENST00000596308 1422 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 AC136759.1-202ENST00000530858 2194 ntBASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.03□□□□□ -0.32
ANKRD55Q3KP44 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 AL928921.2-201ENST00000641325 2442 ntBASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 HSPA7-201ENST00000445535 1927 ntBASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
ANKRD55Q3KP44 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 AL513480.1-201ENST00000451731 511 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 AC009078.2-202ENST00000463353 338 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 CXCL1P1-201ENST00000502804 216 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 SLC25A6P4-201ENST00000586535 553 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 AC004790.2-201ENST00000623588 572 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PMS2P7-201ENST00000506558 1336 ntBASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 AC097359.2-201ENST00000604992 2389 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms