Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AL603832.2-201ENST00000566195 2125 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 MIR663B-201ENST00000408361 115 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 KRT18P64-201ENST00000434946 1219 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AL591846.1-201ENST00000451736 433 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AC022137.2-201ENST00000503482 481 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AL354718.3-201ENST00000616414 581 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 CR382287.1-201ENST00000623954 586 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 LINC01144-201ENST00000626198 1710 ntBASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTC1Q2NKJ3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AC006001.1-201ENST00000325130 474 ntBASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 Z93015.1-201ENST00000451718 390 ntBASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AC016629.1-201ENST00000596579 586 ntBASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 LINC02228-204ENST00000642115 2962 ntBASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.65■□□□□ 0.26
CTC1Q2NKJ3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTC1Q2NKJ3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTC1Q2NKJ3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CTC1Q2NKJ3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms