Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.93□□□□□ -0.18
EFNB1P98172 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.93□□□□□ -0.18
EFNB1P98172 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.93□□□□□ -0.18
EFNB1P98172 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNB1P98172 FAM58CP-201ENST00000435741 640 ntBASIC13.93□□□□□ -0.18
EFNB1P98172 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNB1P98172 AC069335.1-201ENST00000489972 472 ntBASIC13.93□□□□□ -0.18
EFNB1P98172 RNA5SP416-201ENST00000516838 111 ntBASIC13.93□□□□□ -0.18
EFNB1P98172 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNB1P98172 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 AL133215.2-201ENST00000609242 977 ntBASIC13.93□□□□□ -0.18
EFNB1P98172 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 AL928921.2-201ENST00000641325 2442 ntBASIC13.93□□□□□ -0.18
EFNB1P98172 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
EFNB1P98172 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNB1P98172 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
EFNB1P98172 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
EFNB1P98172 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
EFNB1P98172 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
EFNB1P98172 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
EFNB1P98172 IL9RP2-201ENST00000423948 1312 ntBASIC13.92□□□□□ -0.18
EFNB1P98172 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 AC015802.1-201ENST00000588104 1449 ntBASIC13.92□□□□□ -0.18
EFNB1P98172 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 KRT18P3-201ENST00000451602 1288 ntBASIC13.92□□□□□ -0.18
EFNB1P98172 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 IGHV3-62-201ENST00000520057 340 ntBASIC13.92□□□□□ -0.18
EFNB1P98172 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNB1P98172 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNB1P98172 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNB1P98172 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNB1P98172 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNB1P98172 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 FAM197Y3-203ENST00000618346 717 ntBASIC13.92□□□□□ -0.18
EFNB1P98172 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNB1P98172 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNB1P98172 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.91□□□□□ -0.18
EFNB1P98172 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.91□□□□□ -0.18
EFNB1P98172 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
EFNB1P98172 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNB1P98172 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms