Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D3P61077 AC018892.3-201ENST00000623986 2499 ntBASIC11.19□□□□□ -0.62
UBE2D3P61077 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D3P61077 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D3P61077 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2D3P61077 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2D3P61077 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D3P61077 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2D3P61077 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2D3P61077 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D3P61077 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D3P61077 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 BEND3P1-201ENST00000421591 1944 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 MIR346-201ENST00000362234 95 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 AC023274.1-201ENST00000418278 595 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 AL139010.1-201ENST00000454878 894 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 IGHV3-62-201ENST00000520057 340 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.18□□□□□ -0.62
UBE2D3P61077 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.18□□□□□ -0.62
UBE2D3P61077 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.18□□□□□ -0.62
UBE2D3P61077 AC243562.1-201ENST00000560672 389 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 AC040169.1-201ENST00000565382 521 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.18□□□□□ -0.62
UBE2D3P61077 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 MIR4313-201ENST00000580760 101 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 AL450472.2-201ENST00000603663 1156 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 AC026979.3-201ENST00000607315 403 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
UBE2D3P61077 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 AL136982.4-201ENST00000437689 1740 ntBASIC11.18□□□□□ -0.62
UBE2D3P61077 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D3P61077 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D3P61077 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D3P61077 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D3P61077 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D3P61077 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D3P61077 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D3P61077 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D3P61077 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
UBE2D3P61077 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D3P61077 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms