Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.34□□□□□ -0.11
CDC42P60953 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 AC140658.5-201ENST00000438532 169 ntBASIC14.34□□□□□ -0.11
CDC42P60953 VN2R19P-201ENST00000442399 1052 ntBASIC14.34□□□□□ -0.11
CDC42P60953 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 AC098859.1-201ENST00000502915 1238 ntBASIC14.34□□□□□ -0.11
CDC42P60953 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC42P60953 AC012640.2-201ENST00000561606 901 ntBASIC14.34□□□□□ -0.11
CDC42P60953 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC42P60953 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC42P60953 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 TP73-AS1-207ENST00000624167 988 ntBASIC14.34□□□□□ -0.11
CDC42P60953 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.34□□□□□ -0.11
CDC42P60953 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 CICP14-201ENST00000629111 2732 ntBASIC14.34□□□□□ -0.11
CDC42P60953 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.34□□□□□ -0.11
CDC42P60953 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42P60953 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42P60953 INTS4P1-203ENST00000641008 3683 ntBASIC14.34□□□□□ -0.11
CDC42P60953 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDC42P60953 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42P60953 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC42P60953 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDC42P60953 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDC42P60953 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDC42P60953 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC42P60953 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDC42P60953 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC42P60953 AC061975.2-201ENST00000581722 295 ntBASIC14.33□□□□□ -0.12
CDC42P60953 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.33□□□□□ -0.12
CDC42P60953 AL161645.1-201ENST00000622716 1255 ntBASIC14.33□□□□□ -0.12
CDC42P60953 AC007064.4-201ENST00000637740 555 ntBASIC14.33□□□□□ -0.12
CDC42P60953 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC42P60953 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDC42P60953 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42P60953 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CDC42P60953 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42P60953 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC42P60953 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42P60953 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42P60953 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDC42P60953 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42P60953 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42P60953 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CDC42P60953 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42P60953 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC42P60953 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC42P60953 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42P60953 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms