Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLDN2P57739 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 AC022137.2-201ENST00000503482 481 ntBASIC15.36■□□□□ 0.05
CLDN2P57739 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.36■□□□□ 0.05
CLDN2P57739 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.36■□□□□ 0.05
CLDN2P57739 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN2P57739 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.36■□□□□ 0.05
CLDN2P57739 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 AC132872.4-202ENST00000622924 2756 ntBASIC15.36■□□□□ 0.05
CLDN2P57739 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN2P57739 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN2P57739 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN2P57739 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN2P57739 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 FAM86MP-201ENST00000340703 885 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 ACKR1-201ENST00000368121 1240 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN2P57739 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN2P57739 AL583810.1-201ENST00000553344 1045 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 GNRHR2-203ENST00000581100 1187 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 AC025181.2-201ENST00000606994 802 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN2P57739 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 AC092127.1-201ENST00000567093 3455 ntBASIC15.35■□□□□ 0.05
CLDN2P57739 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN2P57739 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN2P57739 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
CLDN2P57739 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN2P57739 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN2P57739 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN2P57739 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN2P57739 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN2P57739 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN2P57739 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLDN2P57739 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLDN2P57739 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms