Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC104457.1-201ENST00000401024 814 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 AC236430.1-201ENST00000402231 743 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 PIN1P1-201ENST00000412108 996 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 GAPDHP40-201ENST00000505218 1006 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.1□□□□□ -0.15
SUMO3P55854 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.1□□□□□ -0.15
SUMO3P55854 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.1□□□□□ -0.15
SUMO3P55854 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 AL049840.4-201ENST00000602422 811 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
SUMO3P55854 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
SUMO3P55854 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 AL442647.2-201ENST00000429864 857 ntBASIC14.09□□□□□ -0.15
SUMO3P55854 HMGN1P19-201ENST00000436976 333 ntBASIC14.09□□□□□ -0.15
SUMO3P55854 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.09□□□□□ -0.15
SUMO3P55854 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.09□□□□□ -0.15
SUMO3P55854 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 BRI3BPP1-201ENST00000594224 787 ntBASIC14.09□□□□□ -0.15
SUMO3P55854 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.09□□□□□ -0.15
SUMO3P55854 AC007541.1-201ENST00000570282 1469 ntBASIC14.09□□□□□ -0.15
SUMO3P55854 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SUMO3P55854 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SUMO3P55854 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SUMO3P55854 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SUMO3P55854 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.08□□□□□ -0.15
SUMO3P55854 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SUMO3P55854 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SUMO3P55854 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.08□□□□□ -0.16
SUMO3P55854 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.08□□□□□ -0.16
SUMO3P55854 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.08□□□□□ -0.16
SUMO3P55854 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.08□□□□□ -0.16
SUMO3P55854 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 MIR661-201ENST00000384842 89 ntBASIC14.08□□□□□ -0.16
SUMO3P55854 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.08□□□□□ -0.16
SUMO3P55854 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.08□□□□□ -0.16
SUMO3P55854 AC026410.3-201ENST00000514280 936 ntBASIC14.08□□□□□ -0.16
SUMO3P55854 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.08□□□□□ -0.16
SUMO3P55854 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.08□□□□□ -0.16
SUMO3P55854 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.08□□□□□ -0.16
SUMO3P55854 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.08□□□□□ -0.16
SUMO3P55854 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SUMO3P55854 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.08□□□□□ -0.16
SUMO3P55854 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.08□□□□□ -0.16
SUMO3P55854 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms